Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.6□□□□□ -0.39
ClppO88696 Gm43179-201ENSMUST00000198797 275 ntBASIC12.6□□□□□ -0.39
ClppO88696 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
ClppO88696 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.6□□□□□ -0.39
ClppO88696 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ClppO88696 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ClppO88696 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.6□□□□□ -0.39
ClppO88696 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
ClppO88696 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.6□□□□□ -0.39
ClppO88696 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ClppO88696 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
ClppO88696 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ClppO88696 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ClppO88696 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.59□□□□□ -0.39
ClppO88696 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.59□□□□□ -0.39
ClppO88696 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.59□□□□□ -0.39
ClppO88696 Gm16379-201ENSMUST00000161469 348 ntBASIC12.59□□□□□ -0.39
ClppO88696 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.59□□□□□ -0.39
ClppO88696 Gm8762-201ENSMUST00000193486 339 ntBASIC12.59□□□□□ -0.39
ClppO88696 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.59□□□□□ -0.39
ClppO88696 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.59□□□□□ -0.39
ClppO88696 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.59□□□□□ -0.39
ClppO88696 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.59□□□□□ -0.39
ClppO88696 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.59□□□□□ -0.39
ClppO88696 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.59□□□□□ -0.39
ClppO88696 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.59□□□□□ -0.39
ClppO88696 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.59□□□□□ -0.39
ClppO88696 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ClppO88696 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
ClppO88696 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
ClppO88696 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClppO88696 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ClppO88696 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ClppO88696 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ClppO88696 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
ClppO88696 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.58□□□□□ -0.4
ClppO88696 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ClppO88696 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.58□□□□□ -0.4
ClppO88696 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
ClppO88696 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Gm11637-201ENSMUST00000120601 592 ntBASIC12.58□□□□□ -0.4
ClppO88696 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
ClppO88696 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ClppO88696 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.58□□□□□ -0.4
ClppO88696 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Gm38002-201ENSMUST00000193255 180 ntBASIC12.58□□□□□ -0.4
ClppO88696 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
ClppO88696 Gm44069-201ENSMUST00000204898 506 ntBASIC12.58□□□□□ -0.4
ClppO88696 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.58□□□□□ -0.4
ClppO88696 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.58□□□□□ -0.4
ClppO88696 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.58□□□□□ -0.4
ClppO88696 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms