Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BckdkO55028 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
BckdkO55028 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
BckdkO55028 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
BckdkO55028 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BckdkO55028 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
BckdkO55028 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
BckdkO55028 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BckdkO55028 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BckdkO55028 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
BckdkO55028 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
BckdkO55028 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.92□□□□□ -0.5
BckdkO55028 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
BckdkO55028 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BckdkO55028 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.92□□□□□ -0.5
BckdkO55028 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BckdkO55028 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
BckdkO55028 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.91□□□□□ -0.5
BckdkO55028 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.91□□□□□ -0.5
BckdkO55028 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
BckdkO55028 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.91□□□□□ -0.5
BckdkO55028 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
BckdkO55028 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.91□□□□□ -0.5
BckdkO55028 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
BckdkO55028 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
BckdkO55028 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
BckdkO55028 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
BckdkO55028 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.91□□□□□ -0.5
BckdkO55028 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.91□□□□□ -0.5
BckdkO55028 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.91□□□□□ -0.5
BckdkO55028 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
BckdkO55028 Gm37922-201ENSMUST00000195596 455 ntBASIC11.91□□□□□ -0.5
BckdkO55028 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.91□□□□□ -0.5
BckdkO55028 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.91□□□□□ -0.5
BckdkO55028 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.91□□□□□ -0.5
BckdkO55028 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.91□□□□□ -0.5
BckdkO55028 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
BckdkO55028 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.91□□□□□ -0.5
BckdkO55028 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
BckdkO55028 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
BckdkO55028 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BckdkO55028 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
BckdkO55028 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.9□□□□□ -0.5
BckdkO55028 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.9□□□□□ -0.5
BckdkO55028 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.9□□□□□ -0.5
BckdkO55028 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.9□□□□□ -0.5
BckdkO55028 Gm27514-201ENSMUST00000183692 110 ntBASIC11.9□□□□□ -0.5
BckdkO55028 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.9□□□□□ -0.5
BckdkO55028 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.9□□□□□ -0.5
BckdkO55028 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
BckdkO55028 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
BckdkO55028 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.9□□□□□ -0.5
BckdkO55028 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
BckdkO55028 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.9□□□□□ -0.5
BckdkO55028 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.9□□□□□ -0.5
BckdkO55028 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
BckdkO55028 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
BckdkO55028 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms