Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Smarce1O54941 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Smarce1O54941 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.24■□□□□ 0.03
Smarce1O54941 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.24■□□□□ 0.03
Smarce1O54941 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Smarce1O54941 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.24■□□□□ 0.03
Smarce1O54941 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Smarce1O54941 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.24■□□□□ 0.03
Smarce1O54941 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.24■□□□□ 0.03
Smarce1O54941 Mir6392-201ENSMUST00000184924 108 ntBASIC15.24■□□□□ 0.03
Smarce1O54941 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.24■□□□□ 0.03
Smarce1O54941 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.24■□□□□ 0.03
Smarce1O54941 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC15.24■□□□□ 0.03
Smarce1O54941 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Smarce1O54941 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Smarce1O54941 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Smarce1O54941 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarce1O54941 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarce1O54941 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarce1O54941 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarce1O54941 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarce1O54941 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarce1O54941 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.23■□□□□ 0.03
Smarce1O54941 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarce1O54941 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Smarce1O54941 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Smarce1O54941 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarce1O54941 Gm44292-201ENSMUST00000205194 2364 ntBASIC15.23■□□□□ 0.03
Smarce1O54941 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Smarce1O54941 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.23■□□□□ 0.03
Smarce1O54941 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.23■□□□□ 0.03
Smarce1O54941 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.23■□□□□ 0.03
Smarce1O54941 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.23■□□□□ 0.03
Smarce1O54941 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.23■□□□□ 0.03
Smarce1O54941 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarce1O54941 Gm37391-201ENSMUST00000194891 2318 ntBASIC15.23■□□□□ 0.03
Smarce1O54941 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Smarce1O54941 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarce1O54941 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarce1O54941 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarce1O54941 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarce1O54941 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Smarce1O54941 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarce1O54941 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarce1O54941 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.22■□□□□ 0.03
Smarce1O54941 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarce1O54941 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarce1O54941 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarce1O54941 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarce1O54941 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarce1O54941 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarce1O54941 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarce1O54941 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarce1O54941 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarce1O54941 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.22■□□□□ 0.03
Smarce1O54941 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.22■□□□□ 0.03
Smarce1O54941 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarce1O54941 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.22■□□□□ 0.03
Smarce1O54941 Gm44124-201ENSMUST00000204159 472 ntBASIC15.22■□□□□ 0.03
Smarce1O54941 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarce1O54941 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Smarce1O54941 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.22■□□□□ 0.03
Smarce1O54941 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smarce1O54941 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarce1O54941 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarce1O54941 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarce1O54941 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarce1O54941 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarce1O54941 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smarce1O54941 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarce1O54941 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarce1O54941 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.21■□□□□ 0.03
Smarce1O54941 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms