Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.18□□□□□ -0.62
Atf6bO35451 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.18□□□□□ -0.62
Atf6bO35451 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.18□□□□□ -0.62
Atf6bO35451 Gm22331-201ENSMUST00000158066 136 ntBASIC11.18□□□□□ -0.62
Atf6bO35451 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.18□□□□□ -0.62
Atf6bO35451 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Atf6bO35451 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.18□□□□□ -0.62
Atf6bO35451 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.18□□□□□ -0.62
Atf6bO35451 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Atf6bO35451 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.18□□□□□ -0.62
Atf6bO35451 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.18□□□□□ -0.62
Atf6bO35451 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.18□□□□□ -0.62
Atf6bO35451 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.18□□□□□ -0.62
Atf6bO35451 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.18□□□□□ -0.62
Atf6bO35451 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.18□□□□□ -0.62
Atf6bO35451 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6bO35451 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Atf6bO35451 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Atf6bO35451 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.17□□□□□ -0.62
Atf6bO35451 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.17□□□□□ -0.62
Atf6bO35451 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.17□□□□□ -0.62
Atf6bO35451 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Atf6bO35451 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.17□□□□□ -0.62
Atf6bO35451 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.17□□□□□ -0.62
Atf6bO35451 Gm29127-201ENSMUST00000188304 517 ntBASIC11.17□□□□□ -0.62
Atf6bO35451 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Atf6bO35451 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.17□□□□□ -0.62
Atf6bO35451 Gm37922-201ENSMUST00000195596 455 ntBASIC11.17□□□□□ -0.62
Atf6bO35451 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.17□□□□□ -0.62
Atf6bO35451 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.17□□□□□ -0.62
Atf6bO35451 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.17□□□□□ -0.62
Atf6bO35451 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.17□□□□□ -0.62
Atf6bO35451 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Atf6bO35451 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.17□□□□□ -0.62
Atf6bO35451 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.17□□□□□ -0.62
Atf6bO35451 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6bO35451 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Atf6bO35451 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Atf6bO35451 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Atf6bO35451 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.16□□□□□ -0.62
Atf6bO35451 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Atf6bO35451 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Atf6bO35451 Mir874-201ENSMUST00000104769 76 ntBASIC11.16□□□□□ -0.62
Atf6bO35451 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.16□□□□□ -0.62
Atf6bO35451 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.16□□□□□ -0.62
Atf6bO35451 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Gm14127-201ENSMUST00000117906 678 ntBASIC11.16□□□□□ -0.62
Atf6bO35451 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Gm27331-201ENSMUST00000183705 60 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms