Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf11bO08712 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf11bO08712 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.02□□□□□ -0.33
Tnfrsf11bO08712 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf11bO08712 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf11bO08712 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf11bO08712 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf11bO08712 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.02□□□□□ -0.33
Tnfrsf11bO08712 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf11bO08712 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf11bO08712 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf11bO08712 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf11bO08712 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Tnfrsf11bO08712 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf11bO08712 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf11bO08712 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Gm8213-201ENSMUST00000118191 441 ntBASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Gm10156-201ENSMUST00000122364 462 ntBASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Gm6180-201ENSMUST00000065243 498 ntBASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf11bO08712 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13□□□□□ -0.33
Tnfrsf11bO08712 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Gm14608-201ENSMUST00000120030 1553 ntBASIC13□□□□□ -0.33
Tnfrsf11bO08712 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13□□□□□ -0.33
Tnfrsf11bO08712 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Gm9115-201ENSMUST00000120192 1348 ntBASIC13□□□□□ -0.33
Tnfrsf11bO08712 Mir692-1-201ENSMUST00000102263 109 ntBASIC13□□□□□ -0.33
Tnfrsf11bO08712 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Gm14704-201ENSMUST00000120300 874 ntBASIC13□□□□□ -0.33
Tnfrsf11bO08712 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Gm23984-201ENSMUST00000157139 203 ntBASIC13□□□□□ -0.33
Tnfrsf11bO08712 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Gm8515-201ENSMUST00000194852 576 ntBASIC13□□□□□ -0.33
Tnfrsf11bO08712 Gm37922-201ENSMUST00000195596 455 ntBASIC13□□□□□ -0.33
Tnfrsf11bO08712 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf11bO08712 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13□□□□□ -0.33
Tnfrsf11bO08712 AC134254.1-201ENSMUST00000221362 167 ntBASIC13□□□□□ -0.33
Tnfrsf11bO08712 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf11bO08712 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms