Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.39□□□□□ -0.59
Raet1aO08602 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Raet1aO08602 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Raet1aO08602 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.38□□□□□ -0.59
Raet1aO08602 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.38□□□□□ -0.59
Raet1aO08602 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.38□□□□□ -0.59
Raet1aO08602 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Raet1aO08602 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.38□□□□□ -0.59
Raet1aO08602 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.38□□□□□ -0.59
Raet1aO08602 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Raet1aO08602 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.38□□□□□ -0.59
Raet1aO08602 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.38□□□□□ -0.59
Raet1aO08602 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.38□□□□□ -0.59
Raet1aO08602 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Gm11637-201ENSMUST00000120601 592 ntBASIC11.38□□□□□ -0.59
Raet1aO08602 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.38□□□□□ -0.59
Raet1aO08602 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.38□□□□□ -0.59
Raet1aO08602 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Gm27331-201ENSMUST00000183705 60 ntBASIC11.38□□□□□ -0.59
Raet1aO08602 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.38□□□□□ -0.59
Raet1aO08602 Gm29705-201ENSMUST00000212598 474 ntBASIC11.38□□□□□ -0.59
Raet1aO08602 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.38□□□□□ -0.59
Raet1aO08602 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Raet1aO08602 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.38□□□□□ -0.59
Raet1aO08602 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Raet1aO08602 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.38□□□□□ -0.59
Raet1aO08602 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Raet1aO08602 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Raet1aO08602 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Raet1aO08602 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.37□□□□□ -0.59
Raet1aO08602 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Raet1aO08602 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Raet1aO08602 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Raet1aO08602 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Raet1aO08602 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Raet1aO08602 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Raet1aO08602 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.37□□□□□ -0.59
Raet1aO08602 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Raet1aO08602 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Raet1aO08602 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Raet1aO08602 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Raet1aO08602 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Raet1aO08602 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Raet1aO08602 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Raet1aO08602 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Raet1aO08602 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.37□□□□□ -0.59
Raet1aO08602 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.37□□□□□ -0.59
Raet1aO08602 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.37□□□□□ -0.59
Raet1aO08602 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.37□□□□□ -0.59
Raet1aO08602 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.37□□□□□ -0.59
Raet1aO08602 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Raet1aO08602 Mir339-201ENSMUST00000083659 96 ntBASIC11.37□□□□□ -0.59
Raet1aO08602 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.37□□□□□ -0.59
Raet1aO08602 Gm6091-201ENSMUST00000098307 165 ntBASIC11.37□□□□□ -0.59
Raet1aO08602 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Raet1aO08602 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Raet1aO08602 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Raet1aO08602 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Raet1aO08602 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms