Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp35M0QWN7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Gm13123-201ENSMUST00000122173 492 ntBASIC13.82□□□□□ -0.2
Usp35M0QWN7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.82□□□□□ -0.2
Usp35M0QWN7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Gm44069-201ENSMUST00000204898 506 ntBASIC13.82□□□□□ -0.2
Usp35M0QWN7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Usp35M0QWN7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.82□□□□□ -0.2
Usp35M0QWN7 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.82□□□□□ -0.2
Usp35M0QWN7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.82□□□□□ -0.2
Usp35M0QWN7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp35M0QWN7 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.81□□□□□ -0.2
Usp35M0QWN7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.81□□□□□ -0.2
Usp35M0QWN7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Gm16202-201ENSMUST00000117532 544 ntBASIC13.81□□□□□ -0.2
Usp35M0QWN7 Gm14723-201ENSMUST00000118686 215 ntBASIC13.81□□□□□ -0.2
Usp35M0QWN7 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Gm27501-201ENSMUST00000183599 107 ntBASIC13.81□□□□□ -0.2
Usp35M0QWN7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Gm38266-201ENSMUST00000194931 421 ntBASIC13.81□□□□□ -0.2
Usp35M0QWN7 Gm43133-201ENSMUST00000197472 463 ntBASIC13.81□□□□□ -0.2
Usp35M0QWN7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Gm3961-201ENSMUST00000204425 994 ntBASIC13.81□□□□□ -0.2
Usp35M0QWN7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp35M0QWN7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms