Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Gm11618-201ENSMUST00000117946 267 ntBASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Gm11918-201ENSMUST00000121660 179 ntBASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Gm45384-201ENSMUST00000210451 277 ntBASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Gm26035-201ENSMUST00000083065 308 ntBASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Mir339-201ENSMUST00000083659 96 ntBASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh9F8VPK8 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Gm14921-201ENSMUST00000118643 908 ntBASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Gm9794-201ENSMUST00000202370 423 ntBASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh9F8VPK8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms