Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Mir6420-201ENSMUST00000185032 102 ntBASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb9E9Q5G2 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.05■□□□□ 0
Pcdhb9E9Q5G2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb9E9Q5G2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb9E9Q5G2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb9E9Q5G2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb9E9Q5G2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb9E9Q5G2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Pcdhb9E9Q5G2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Pcdhb9E9Q5G2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb9E9Q5G2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
Pcdhb9E9Q5G2 Gm13875-201ENSMUST00000120162 282 ntBASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Gm13342-201ENSMUST00000121055 207 ntBASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Gm8018-201ENSMUST00000173536 789 ntBASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Gm38266-201ENSMUST00000194931 421 ntBASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Gm45925-201ENSMUST00000218882 744 ntBASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Cts7-204ENSMUST00000225321 1257 ntBASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb9E9Q5G2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Gm2991-201ENSMUST00000173338 480 ntBASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 206.4 ms