Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Daam2-202ENSMUST00000224595 1926 ntBASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Gm2546-201ENSMUST00000182630 991 ntBASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Mir433-201ENSMUST00000093564 124 ntBASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.65□□□□□ -0.38
Srp54bE9PXC0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Srp54bE9PXC0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.65□□□□□ -0.39
Srp54bE9PXC0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
Srp54bE9PXC0 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.64□□□□□ -0.39
Srp54bE9PXC0 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Gm12291-201ENSMUST00000121627 311 ntBASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Gm38092-201ENSMUST00000195600 653 ntBASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.64□□□□□ -0.39
Srp54bE9PXC0 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Gm22058-201ENSMUST00000083393 310 ntBASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.64□□□□□ -0.39
Srp54bE9PXC0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.64□□□□□ -0.39
Srp54bE9PXC0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srp54bE9PXC0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms