Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Gm15371-201ENSMUST00000117057 784 ntBASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm28043E0CXC2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Gm13689-201ENSMUST00000119360 685 ntBASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Gm8515-201ENSMUST00000194852 576 ntBASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Gm42550-201ENSMUST00000201553 960 ntBASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.87□□□□□ -0.35
Gm28043E0CXC2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms