Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.97□□□□□ -0.01
Scn11aQ9R053 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.97□□□□□ -0.01
Scn11aQ9R053 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.97□□□□□ -0.01
Scn11aQ9R053 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.97□□□□□ -0.01
Scn11aQ9R053 Gm37905-201ENSMUST00000195310 341 ntBASIC14.97□□□□□ -0.01
Scn11aQ9R053 AC124457.1-201ENSMUST00000198845 120 ntBASIC14.97□□□□□ -0.01
Scn11aQ9R053 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.97□□□□□ -0.01
Scn11aQ9R053 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Scn11aQ9R053 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.97□□□□□ -0.01
Scn11aQ9R053 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Gm7666-201ENSMUST00000146631 819 ntBASIC14.96□□□□□ -0.01
Scn11aQ9R053 Gm17391-201ENSMUST00000171036 126 ntBASIC14.96□□□□□ -0.01
Scn11aQ9R053 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.96□□□□□ -0.01
Scn11aQ9R053 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn11aQ9R053 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.96□□□□□ -0.01
Scn11aQ9R053 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Scn11aQ9R053 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scn11aQ9R053 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.96□□□□□ -0.02
Scn11aQ9R053 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Scn11aQ9R053 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Scn11aQ9R053 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.96□□□□□ -0.02
Scn11aQ9R053 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.96□□□□□ -0.02
Scn11aQ9R053 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.96□□□□□ -0.02
Scn11aQ9R053 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Scn11aQ9R053 Gm17040-202ENSMUST00000170597 889 ntBASIC14.96□□□□□ -0.02
Scn11aQ9R053 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.96□□□□□ -0.02
Scn11aQ9R053 AC154176.1-201ENSMUST00000225897 220 ntBASIC14.96□□□□□ -0.02
Scn11aQ9R053 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Scn11aQ9R053 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Scn11aQ9R053 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Scn11aQ9R053 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Scn11aQ9R053 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Scn11aQ9R053 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Scn11aQ9R053 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn11aQ9R053 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.95□□□□□ -0.02
Scn11aQ9R053 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn11aQ9R053 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.95□□□□□ -0.02
Scn11aQ9R053 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn11aQ9R053 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn11aQ9R053 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn11aQ9R053 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn11aQ9R053 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.95□□□□□ -0.02
Scn11aQ9R053 Gm14644-201ENSMUST00000116671 647 ntBASIC14.95□□□□□ -0.02
Scn11aQ9R053 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.95□□□□□ -0.02
Scn11aQ9R053 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.95□□□□□ -0.02
Scn11aQ9R053 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Scn11aQ9R053 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn11aQ9R053 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn11aQ9R053 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn11aQ9R053 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Scn11aQ9R053 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn11aQ9R053 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Scn11aQ9R053 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms