Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Gm42627-201ENSMUST00000197347 224 ntBASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf3Q9QXK7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Gm6023-201ENSMUST00000118217 606 ntBASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Gm16296-201ENSMUST00000159905 325 ntBASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Gm27501-201ENSMUST00000183599 107 ntBASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf3Q9QXK7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf3Q9QXK7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf3Q9QXK7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf3Q9QXK7 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf3Q9QXK7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf3Q9QXK7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf3Q9QXK7 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf3Q9QXK7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf3Q9QXK7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf3Q9QXK7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf3Q9QXK7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf3Q9QXK7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.78□□□□□ -0.2
Cpsf3Q9QXK7 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Cpsf3Q9QXK7 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms