Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rrp8Q9DB85 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rrp8Q9DB85 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rrp8Q9DB85 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rrp8Q9DB85 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Gm12176-201ENSMUST00000121420 875 ntBASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Gm25700-201ENSMUST00000177693 110 ntBASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Gm27023-201ENSMUST00000182372 285 ntBASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Gm28450-201ENSMUST00000187349 638 ntBASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.57□□□□□ -0.4
Rrp8Q9DB85 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rrp8Q9DB85 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp8Q9DB85 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp8Q9DB85 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rrp8Q9DB85 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp8Q9DB85 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Rrp8Q9DB85 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.56□□□□□ -0.4
Rrp8Q9DB85 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp8Q9DB85 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms