Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Mir7085-201ENSMUST00000184353 66 ntBASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2aQ9DB34 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Gm17208-201ENSMUST00000168388 535 ntBASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2aQ9DB34 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms