Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc130Q9D516 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc130Q9D516 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc130Q9D516 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc130Q9D516 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Ccdc130Q9D516 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Ccdc130Q9D516 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc130Q9D516 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc130Q9D516 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Mir6392-201ENSMUST00000184924 108 ntBASIC12.95□□□□□ -0.34
Ccdc130Q9D516 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.95□□□□□ -0.34
Ccdc130Q9D516 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc130Q9D516 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Mir7654-201ENSMUST00000185082 70 ntBASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Gm38223-201ENSMUST00000194484 695 ntBASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc130Q9D516 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc130Q9D516 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms