Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Snora73a-201ENSMUST00000082453 205 ntBASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps28Q9D1C8 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.17□□□□□ -0.3
Vps28Q9D1C8 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.17□□□□□ -0.3
Vps28Q9D1C8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps28Q9D1C8 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vps28Q9D1C8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms