Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim13Q9CYB0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim13Q9CYB0 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Gm11434-201ENSMUST00000122379 629 ntBASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Gm27618-201ENSMUST00000183671 60 ntBASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim13Q9CYB0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms