Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf135Q9CWS1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf135Q9CWS1 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Gm16202-201ENSMUST00000117532 544 ntBASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Gm44069-201ENSMUST00000204898 506 ntBASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf135Q9CWS1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms