Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim11Q99PQ2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim11Q99PQ2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim11Q99PQ2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim11Q99PQ2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim11Q99PQ2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trim11Q99PQ2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
Trim11Q99PQ2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trim11Q99PQ2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trim11Q99PQ2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.64□□□□□ -0.07
Trim11Q99PQ2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim11Q99PQ2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Gm17794-201ENSMUST00000220252 955 ntBASIC14.63□□□□□ -0.07
Trim11Q99PQ2 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Gm5356-201ENSMUST00000093326 615 ntBASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.63□□□□□ -0.07
Trim11Q99PQ2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.63□□□□□ -0.07
Trim11Q99PQ2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Gm8805-201ENSMUST00000117848 313 ntBASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Mir1894-201ENSMUST00000122802 81 ntBASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Gm6244-201ENSMUST00000178732 841 ntBASIC14.62□□□□□ -0.07
Trim11Q99PQ2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms