Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Gm13689-201ENSMUST00000119360 685 ntBASIC12.61□□□□□ -0.39
Trim8Q99PJ2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Gm7730-201ENSMUST00000212486 454 ntBASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Gm26315-201ENSMUST00000083890 321 ntBASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim8Q99PJ2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Gm14719-201ENSMUST00000121891 340 ntBASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Gm16215-201ENSMUST00000161990 637 ntBASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim8Q99PJ2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms