Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm12943-201ENSMUST00000119616 210 ntBASIC12.72□□□□□ -0.37
Cdh23Q99PF4 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Gm25998-201ENSMUST00000175397 53 ntBASIC12.72□□□□□ -0.37
Cdh23Q99PF4 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Gm42511-201ENSMUST00000196160 234 ntBASIC12.72□□□□□ -0.37
Cdh23Q99PF4 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Gm25076-201ENSMUST00000104098 132 ntBASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Mir339-201ENSMUST00000083659 96 ntBASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Gm24844-201ENSMUST00000158679 127 ntBASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh23Q99PF4 Gm26013-201ENSMUST00000104404 119 ntBASIC12.71□□□□□ -0.38
Cdh23Q99PF4 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.71□□□□□ -0.38
Cdh23Q99PF4 Gm8531-201ENSMUST00000188319 893 ntBASIC12.71□□□□□ -0.38
Cdh23Q99PF4 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Cdh23Q99PF4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh23Q99PF4 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh23Q99PF4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh23Q99PF4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh23Q99PF4 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh23Q99PF4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC12.71□□□□□ -0.38
Cdh23Q99PF4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cdh23Q99PF4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh23Q99PF4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Gm24248-201ENSMUST00000157321 322 ntBASIC12.7□□□□□ -0.38
Cdh23Q99PF4 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Gm4604-201ENSMUST00000025040 390 ntBASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Gm6855-201ENSMUST00000206307 790 ntBASIC12.7□□□□□ -0.38
Cdh23Q99PF4 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Cdh23Q99PF4 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Gm15003-201ENSMUST00000118884 446 ntBASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Gm18304-201ENSMUST00000189162 546 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms