Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Gm37917-201ENSMUST00000194711 392 ntBASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Gm18624-201ENSMUST00000220966 658 ntBASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Gm16372-201ENSMUST00000073088 450 ntBASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdk5rap3Q99LM2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Gm13813-201ENSMUST00000120998 787 ntBASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Mir6392-201ENSMUST00000184924 108 ntBASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Gm18473-201ENSMUST00000220543 868 ntBASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms