Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 AY702102-202ENSMUST00000194651 1173 ntBASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Gm38092-201ENSMUST00000195600 653 ntBASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Gm16296-201ENSMUST00000159905 325 ntBASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Gm6222-202ENSMUST00000182143 629 ntBASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Gm5370-201ENSMUST00000187187 574 ntBASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha9Q91Y11 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Gm23931-201ENSMUST00000103842 109 ntBASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Gm7809-201ENSMUST00000153199 742 ntBASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Mir7085-201ENSMUST00000184353 66 ntBASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms