Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Gm16296-201ENSMUST00000159905 325 ntBASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb6Q91XZ4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb6Q91XZ4 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Gm7063-201ENSMUST00000186840 981 ntBASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms