Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.75□□□□□ -0.37
Usb1Q91W78 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Gm14350-201ENSMUST00000116642 640 ntBASIC12.75□□□□□ -0.37
Usb1Q91W78 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.75□□□□□ -0.37
Usb1Q91W78 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.75□□□□□ -0.37
Usb1Q91W78 Gm14660-201ENSMUST00000119809 575 ntBASIC12.75□□□□□ -0.37
Usb1Q91W78 Gm11978-201ENSMUST00000122315 466 ntBASIC12.75□□□□□ -0.37
Usb1Q91W78 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.75□□□□□ -0.37
Usb1Q91W78 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Gm27731-201ENSMUST00000185192 107 ntBASIC12.75□□□□□ -0.37
Usb1Q91W78 Gm43818-201ENSMUST00000200605 466 ntBASIC12.75□□□□□ -0.37
Usb1Q91W78 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.75□□□□□ -0.37
Usb1Q91W78 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.75□□□□□ -0.37
Usb1Q91W78 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Usb1Q91W78 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Usb1Q91W78 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usb1Q91W78 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.74□□□□□ -0.37
Usb1Q91W78 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.74□□□□□ -0.37
Usb1Q91W78 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.74□□□□□ -0.37
Usb1Q91W78 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.74□□□□□ -0.37
Usb1Q91W78 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.74□□□□□ -0.37
Usb1Q91W78 Gm12384-201ENSMUST00000119228 919 ntBASIC12.74□□□□□ -0.37
Usb1Q91W78 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Gm8810-201ENSMUST00000172895 754 ntBASIC12.74□□□□□ -0.37
Usb1Q91W78 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.74□□□□□ -0.37
Usb1Q91W78 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.74□□□□□ -0.37
Usb1Q91W78 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Gm9899-201ENSMUST00000065519 555 ntBASIC12.74□□□□□ -0.37
Usb1Q91W78 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.74□□□□□ -0.37
Usb1Q91W78 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.74□□□□□ -0.37
Usb1Q91W78 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.74□□□□□ -0.37
Usb1Q91W78 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Usb1Q91W78 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Usb1Q91W78 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usb1Q91W78 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usb1Q91W78 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usb1Q91W78 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Usb1Q91W78 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.73□□□□□ -0.37
Usb1Q91W78 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usb1Q91W78 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usb1Q91W78 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.73□□□□□ -0.37
Usb1Q91W78 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usb1Q91W78 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.73□□□□□ -0.37
Usb1Q91W78 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usb1Q91W78 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usb1Q91W78 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usb1Q91W78 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usb1Q91W78 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Usb1Q91W78 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usb1Q91W78 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usb1Q91W78 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.73□□□□□ -0.37
Usb1Q91W78 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usb1Q91W78 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usb1Q91W78 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usb1Q91W78 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usb1Q91W78 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Usb1Q91W78 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Usb1Q91W78 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms