Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Gm16372-201ENSMUST00000073088 450 ntBASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Mir433-201ENSMUST00000093564 124 ntBASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdt1Q8R4E9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Gm12241-201ENSMUST00000118330 726 ntBASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Gm43133-201ENSMUST00000197472 463 ntBASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Gm6334-201ENSMUST00000207083 228 ntBASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Gm10268-201ENSMUST00000085340 555 ntBASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdt1Q8R4E9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdt1Q8R4E9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdt1Q8R4E9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Cdt1Q8R4E9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdt1Q8R4E9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdt1Q8R4E9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdt1Q8R4E9 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdt1Q8R4E9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdt1Q8R4E9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdt1Q8R4E9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdt1Q8R4E9 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdt1Q8R4E9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdt1Q8R4E9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdt1Q8R4E9 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms