Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Gm19184-201ENSMUST00000196798 928 ntBASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ebf4Q8K4J2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Gm25287-201ENSMUST00000103846 110 ntBASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Gm22918-201ENSMUST00000103855 110 ntBASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms