Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pabpn1Q8CCS6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pabpn1Q8CCS6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pabpn1Q8CCS6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pabpn1Q8CCS6 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pabpn1Q8CCS6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pabpn1Q8CCS6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Gm19931-201ENSMUST00000198920 368 ntBASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 AC105408.1-201ENSMUST00000227771 802 ntBASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 AC142266.1-201ENSMUST00000228107 415 ntBASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Pabpn1Q8CCS6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Gm13910-201ENSMUST00000121752 1428 ntBASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pabpn1Q8CCS6 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Gm14892-201ENSMUST00000117636 267 ntBASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Gm13204-201ENSMUST00000120110 821 ntBASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Gm15703-201ENSMUST00000120250 880 ntBASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Gm25226-201ENSMUST00000158198 123 ntBASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Gm44506-201ENSMUST00000206278 965 ntBASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms