Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Gm11524-201ENSMUST00000119349 807 ntBASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Gm37917-201ENSMUST00000194711 392 ntBASIC12.05□□□□□ -0.48
Vps9d1Q8C190 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Gm18018-201ENSMUST00000198273 408 ntBASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Gm19078-201ENSMUST00000206311 727 ntBASIC12.05□□□□□ -0.48
Vps9d1Q8C190 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps9d1Q8C190 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Gm12091-201ENSMUST00000146791 830 ntBASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Gm45668-201ENSMUST00000211271 493 ntBASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Gm15823-201ENSMUST00000064305 670 ntBASIC12.04□□□□□ -0.48
Vps9d1Q8C190 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps9d1Q8C190 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms