Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Gm27682-201ENSMUST00000183930 110 ntBASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Gm28693-202ENSMUST00000190758 331 ntBASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 AY702102-202ENSMUST00000194651 1173 ntBASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Srrm4Q8BKA3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Gm1335-201ENSMUST00000121653 386 ntBASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Gm26927-201ENSMUST00000182385 965 ntBASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Srrm4Q8BKA3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Srrm4Q8BKA3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Srrm4Q8BKA3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Srrm4Q8BKA3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Srrm4Q8BKA3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms