Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Gm27701-201ENSMUST00000184498 110 ntBASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Gm8515-201ENSMUST00000194852 576 ntBASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc40Q8BI79 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc40Q8BI79 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc40Q8BI79 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.46□□□□□ -0.26
Ccdc40Q8BI79 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.46□□□□□ -0.26
Ccdc40Q8BI79 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.46□□□□□ -0.26
Ccdc40Q8BI79 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc40Q8BI79 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc40Q8BI79 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Ccdc40Q8BI79 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc40Q8BI79 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc40Q8BI79 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc40Q8BI79 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Gm6152-201ENSMUST00000151704 340 ntBASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Gm2495-201ENSMUST00000191160 466 ntBASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms