Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Gm12341-201ENSMUST00000119724 503 ntBASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.43□□□□□ -0.42
Rnf38Q8BI21 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf38Q8BI21 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Mir686-201ENSMUST00000102174 109 ntBASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Rnf38Q8BI21 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Gm37917-201ENSMUST00000194711 392 ntBASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms