Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Gm1335-201ENSMUST00000121653 386 ntBASIC12.71□□□□□ -0.37
Ubp1Q811S7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Mir1982-201ENSMUST00000157368 74 ntBASIC12.71□□□□□ -0.37
Ubp1Q811S7 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubp1Q811S7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubp1Q811S7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ubp1Q811S7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ubp1Q811S7 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ubp1Q811S7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ubp1Q811S7 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.71□□□□□ -0.38
Ubp1Q811S7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ubp1Q811S7 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.71□□□□□ -0.38
Ubp1Q811S7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ubp1Q811S7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ubp1Q811S7 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.71□□□□□ -0.38
Ubp1Q811S7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Mir686-201ENSMUST00000102174 109 ntBASIC12.7□□□□□ -0.38
Ubp1Q811S7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Gm13226-201ENSMUST00000117838 404 ntBASIC12.7□□□□□ -0.38
Ubp1Q811S7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.7□□□□□ -0.38
Ubp1Q811S7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Gm7029-201ENSMUST00000173226 450 ntBASIC12.7□□□□□ -0.38
Ubp1Q811S7 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.7□□□□□ -0.38
Ubp1Q811S7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Gm10268-201ENSMUST00000085340 555 ntBASIC12.7□□□□□ -0.38
Ubp1Q811S7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.7□□□□□ -0.38
Ubp1Q811S7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Ubp1Q811S7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC12.69□□□□□ -0.38
Ubp1Q811S7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.69□□□□□ -0.38
Ubp1Q811S7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Gm14660-201ENSMUST00000119809 575 ntBASIC12.69□□□□□ -0.38
Ubp1Q811S7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.69□□□□□ -0.38
Ubp1Q811S7 Gm22885-201ENSMUST00000157410 107 ntBASIC12.69□□□□□ -0.38
Ubp1Q811S7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms