Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Gm7553-201ENSMUST00000185805 1426 ntBASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Gm12742-201ENSMUST00000117326 410 ntBASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Gm12957-201ENSMUST00000117835 377 ntBASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Snora78-201ENSMUST00000158630 128 ntBASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Gm10146-201ENSMUST00000072739 309 ntBASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc2Q6PDG5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Gm8805-201ENSMUST00000117848 313 ntBASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.98□□□□□ -0.01
Smarcc2Q6PDG5 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc2Q6PDG5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.97□□□□□ -0.01
Smarcc2Q6PDG5 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc2Q6PDG5 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.97□□□□□ -0.01
Smarcc2Q6PDG5 Gm1335-201ENSMUST00000121653 386 ntBASIC14.97□□□□□ -0.01
Smarcc2Q6PDG5 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.97□□□□□ -0.01
Smarcc2Q6PDG5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
Smarcc2Q6PDG5 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms