Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Gm14704-201ENSMUST00000120300 874 ntBASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Gm12291-201ENSMUST00000121627 311 ntBASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Gm16479-201ENSMUST00000121706 932 ntBASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Mir1894-201ENSMUST00000122802 81 ntBASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sp140Q6NSQ5 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sp140Q6NSQ5 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sp140Q6NSQ5 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sp140Q6NSQ5 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sp140Q6NSQ5 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sp140Q6NSQ5 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.02□□□□□ -0.32
Sp140Q6NSQ5 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sp140Q6NSQ5 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sp140Q6NSQ5 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sp140Q6NSQ5 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sp140Q6NSQ5 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Gm24196-201ENSMUST00000179161 110 ntBASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Gm27892-201ENSMUST00000185017 106 ntBASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Sp140Q6NSQ5 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms