Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Gm4984-201ENSMUST00000115987 360 ntBASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Gm15824-201ENSMUST00000119516 955 ntBASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ParpbpQ6IRT3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Gm14127-201ENSMUST00000117906 678 ntBASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Gm12203-201ENSMUST00000118235 598 ntBASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Gm12209-201ENSMUST00000120089 596 ntBASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Gm8602-201ENSMUST00000184045 607 ntBASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ParpbpQ6IRT3 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.08□□□□□ -0.47
ParpbpQ6IRT3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
ParpbpQ6IRT3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ParpbpQ6IRT3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
ParpbpQ6IRT3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
ParpbpQ6IRT3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Gm13369-201ENSMUST00000119442 987 ntBASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Gm11814-201ENSMUST00000119515 929 ntBASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms