Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Gm44397-201ENSMUST00000195950 113 ntBASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Gm44069-201ENSMUST00000204898 506 ntBASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Itm2b-204ENSMUST00000228637 783 ntBASIC14.2□□□□□ -0.14
Krt39Q6IFX4 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Gm16202-201ENSMUST00000117532 544 ntBASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Gm14928-201ENSMUST00000120198 477 ntBASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Gm18307-201ENSMUST00000206864 949 ntBASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Gm18624-201ENSMUST00000220966 658 ntBASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Krt39Q6IFX4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.18□□□□□ -0.14
Krt39Q6IFX4 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Gm18018-201ENSMUST00000198273 408 ntBASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Gm6458-201ENSMUST00000211573 635 ntBASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt39Q6IFX4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms