Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Foxc1Q61572 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC9.68□□□□□ -0.86
Foxc1Q61572 Gm17063-201ENSMUST00000168135 456 ntBASIC9.68□□□□□ -0.86
Foxc1Q61572 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Foxc1Q61572 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.68□□□□□ -0.86
Foxc1Q61572 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC9.68□□□□□ -0.86
Foxc1Q61572 Gm27839-201ENSMUST00000184242 106 ntBASIC9.68□□□□□ -0.86
Foxc1Q61572 Gm27892-201ENSMUST00000185017 106 ntBASIC9.68□□□□□ -0.86
Foxc1Q61572 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC9.68□□□□□ -0.86
Foxc1Q61572 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Foxc1Q61572 Gm17330-201ENSMUST00000221047 165 ntBASIC9.68□□□□□ -0.86
Foxc1Q61572 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC9.68□□□□□ -0.86
Foxc1Q61572 AC150560.1-201ENSMUST00000227731 1187 ntBASIC9.68□□□□□ -0.86
Foxc1Q61572 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Gm5161-201ENSMUST00000075243 853 ntBASIC9.68□□□□□ -0.86
Foxc1Q61572 Gm24447-201ENSMUST00000083977 338 ntBASIC9.68□□□□□ -0.86
Foxc1Q61572 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Foxc1Q61572 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Foxc1Q61572 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Foxc1Q61572 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Foxc1Q61572 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Gm37160-201ENSMUST00000193081 1689 ntBASIC9.67□□□□□ -0.86
Foxc1Q61572 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Gm21038-201ENSMUST00000222205 1383 ntBASIC9.67□□□□□ -0.86
Foxc1Q61572 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC9.67□□□□□ -0.86
Foxc1Q61572 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Mir1938-201ENSMUST00000158746 100 ntBASIC9.67□□□□□ -0.86
Foxc1Q61572 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Trbv27-201ENSMUST00000193711 277 ntBASIC9.67□□□□□ -0.86
Foxc1Q61572 Gm38223-201ENSMUST00000194484 695 ntBASIC9.67□□□□□ -0.86
Foxc1Q61572 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.67□□□□□ -0.86
Foxc1Q61572 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC9.67□□□□□ -0.86
Foxc1Q61572 RMST_1.1-211ENSMUST00000219726 783 ntTSL 3 BASIC9.67□□□□□ -0.86
Foxc1Q61572 AC155252.1-201ENSMUST00000226462 1208 ntBASIC9.67□□□□□ -0.86
Foxc1Q61572 AC125117.1-201ENSMUST00000228121 468 ntBASIC9.67□□□□□ -0.86
Foxc1Q61572 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Gm7114-201ENSMUST00000190159 1789 ntBASIC9.67□□□□□ -0.86
Foxc1Q61572 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Pck2-205ENSMUST00000226352 2784 ntBASIC9.67□□□□□ -0.86
Foxc1Q61572 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms