Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Gm14921-201ENSMUST00000118643 908 ntBASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Gm10146-201ENSMUST00000072739 309 ntBASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Rnf20Q5DTM8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Gm14704-201ENSMUST00000120300 874 ntBASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Gm27331-201ENSMUST00000183705 60 ntBASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Gm37042-201ENSMUST00000193816 581 ntBASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Gm8099-201ENSMUST00000200510 742 ntBASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Gm29705-201ENSMUST00000212598 474 ntBASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf20Q5DTM8 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms