Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Snora78-201ENSMUST00000158630 128 ntBASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Gm3890-201ENSMUST00000182416 207 ntBASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nhlrc4Q3UP44 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Gm5187-201ENSMUST00000117317 991 ntBASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nhlrc4Q3UP44 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Gm37424-201ENSMUST00000191727 561 ntBASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Gm18584-201ENSMUST00000203098 964 ntBASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Nhlrc4Q3UP44 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms