Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Trim43cP86449 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim43cP86449 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim43cP86449 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim43cP86449 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.97□□□□□ -0.17
Trim43cP86449 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim43cP86449 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim43cP86449 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.97□□□□□ -0.17
Trim43cP86449 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.97□□□□□ -0.17
Trim43cP86449 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.97□□□□□ -0.17
Trim43cP86449 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim43cP86449 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43cP86449 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim43cP86449 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43cP86449 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim43cP86449 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43cP86449 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43cP86449 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Trim43cP86449 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43cP86449 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43cP86449 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43cP86449 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43cP86449 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43cP86449 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trim43cP86449 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Trim43cP86449 Gm12384-201ENSMUST00000119228 919 ntBASIC13.96□□□□□ -0.17
Trim43cP86449 Gm11591-201ENSMUST00000120063 702 ntBASIC13.96□□□□□ -0.17
Trim43cP86449 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim43cP86449 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim43cP86449 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43cP86449 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim43cP86449 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43cP86449 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Trim43cP86449 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim43cP86449 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43cP86449 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43cP86449 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim43cP86449 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim43cP86449 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
Trim43cP86449 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim43cP86449 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.96□□□□□ -0.18
Trim43cP86449 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim43cP86449 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trim43cP86449 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim43cP86449 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim43cP86449 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trim43cP86449 Gm15703-201ENSMUST00000120250 880 ntBASIC13.95□□□□□ -0.18
Trim43cP86449 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.95□□□□□ -0.18
Trim43cP86449 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Gm27731-201ENSMUST00000185192 107 ntBASIC13.95□□□□□ -0.18
Trim43cP86449 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim43cP86449 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.95□□□□□ -0.18
Trim43cP86449 Gm40466-201ENSMUST00000212174 422 ntBASIC13.95□□□□□ -0.18
Trim43cP86449 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim43cP86449 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Trim43cP86449 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.95□□□□□ -0.18
Trim43cP86449 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Trim43cP86449 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim43cP86449 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43cP86449 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms