Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 AW822252-206ENSMUST00000208904 237 ntBASIC10.78□□□□□ -0.68
SgcaP82350 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.78□□□□□ -0.68
SgcaP82350 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.78□□□□□ -0.68
SgcaP82350 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
SgcaP82350 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.78□□□□□ -0.68
SgcaP82350 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.78□□□□□ -0.68
SgcaP82350 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
SgcaP82350 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
SgcaP82350 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.78□□□□□ -0.68
SgcaP82350 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
SgcaP82350 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SgcaP82350 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SgcaP82350 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SgcaP82350 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SgcaP82350 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SgcaP82350 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
SgcaP82350 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
SgcaP82350 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
SgcaP82350 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
SgcaP82350 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
SgcaP82350 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SgcaP82350 Gm13365-201ENSMUST00000121188 973 ntBASIC10.77□□□□□ -0.69
SgcaP82350 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.77□□□□□ -0.69
SgcaP82350 Gm25948-201ENSMUST00000175334 112 ntBASIC10.77□□□□□ -0.69
SgcaP82350 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
SgcaP82350 Gm27494-201ENSMUST00000184735 189 ntBASIC10.77□□□□□ -0.69
SgcaP82350 Gm10766-202ENSMUST00000194123 606 ntBASIC10.77□□□□□ -0.69
SgcaP82350 Gm43514-201ENSMUST00000198852 424 ntBASIC10.77□□□□□ -0.69
SgcaP82350 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
SgcaP82350 Gm5425-201ENSMUST00000214125 459 ntBASIC10.77□□□□□ -0.69
SgcaP82350 Gm9229-201ENSMUST00000222777 126 ntBASIC10.77□□□□□ -0.69
SgcaP82350 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
SgcaP82350 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcaP82350 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.76□□□□□ -0.69
SgcaP82350 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
SgcaP82350 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
SgcaP82350 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
SgcaP82350 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
SgcaP82350 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
SgcaP82350 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.76□□□□□ -0.69
SgcaP82350 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.76□□□□□ -0.69
SgcaP82350 Gm15653-201ENSMUST00000119247 907 ntBASIC10.76□□□□□ -0.69
SgcaP82350 Mir1895-201ENSMUST00000122615 79 ntBASIC10.76□□□□□ -0.69
SgcaP82350 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.76□□□□□ -0.69
SgcaP82350 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.76□□□□□ -0.69
SgcaP82350 Gm27525-201ENSMUST00000184465 107 ntBASIC10.76□□□□□ -0.69
SgcaP82350 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms