Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Gabra1P62812 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.8□□□□□ -0.68
Gabra1P62812 Gm15467-201ENSMUST00000120582 445 ntBASIC10.8□□□□□ -0.68
Gabra1P62812 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Gabra1P62812 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.8□□□□□ -0.68
Gabra1P62812 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.8□□□□□ -0.68
Gabra1P62812 Gm35960-201ENSMUST00000202712 767 ntBASIC10.8□□□□□ -0.68
Gabra1P62812 Gm17330-201ENSMUST00000221047 165 ntBASIC10.8□□□□□ -0.68
Gabra1P62812 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.8□□□□□ -0.68
Gabra1P62812 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Gabra1P62812 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.8□□□□□ -0.68
Gabra1P62812 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Gabra1P62812 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Gabra1P62812 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Gabra1P62812 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.79□□□□□ -0.68
Gabra1P62812 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
Gabra1P62812 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.79□□□□□ -0.68
Gabra1P62812 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Gabra1P62812 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Gabra1P62812 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.79□□□□□ -0.68
Gabra1P62812 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Gabra1P62812 Mir1897-201ENSMUST00000122581 272 ntBASIC10.79□□□□□ -0.68
Gabra1P62812 Mir1895-201ENSMUST00000122615 79 ntBASIC10.79□□□□□ -0.68
Gabra1P62812 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Gabra1P62812 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.79□□□□□ -0.68
Gabra1P62812 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.79□□□□□ -0.68
Gabra1P62812 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.79□□□□□ -0.68
Gabra1P62812 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.79□□□□□ -0.68
Gabra1P62812 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Gabra1P62812 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Gabra1P62812 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC10.79□□□□□ -0.68
Gabra1P62812 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Gabra1P62812 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gabra1P62812 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.78□□□□□ -0.68
Gabra1P62812 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gabra1P62812 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gabra1P62812 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gabra1P62812 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gabra1P62812 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gabra1P62812 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Gabra1P62812 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gabra1P62812 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gabra1P62812 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gabra1P62812 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gabra1P62812 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Gabra1P62812 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Gabra1P62812 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Gabra1P62812 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms