Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Lsm6P62313 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Lsm6P62313 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Lsm6P62313 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.3□□□□□ -0.6
Lsm6P62313 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.3□□□□□ -0.6
Lsm6P62313 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.3□□□□□ -0.6
Lsm6P62313 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Lsm6P62313 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Lsm6P62313 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Lsm6P62313 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.29□□□□□ -0.6
Lsm6P62313 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Lsm6P62313 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
Lsm6P62313 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Lsm6P62313 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Gm12203-201ENSMUST00000118235 598 ntBASIC11.29□□□□□ -0.6
Lsm6P62313 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.29□□□□□ -0.6
Lsm6P62313 Gm12209-201ENSMUST00000120089 596 ntBASIC11.29□□□□□ -0.6
Lsm6P62313 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.29□□□□□ -0.6
Lsm6P62313 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.29□□□□□ -0.6
Lsm6P62313 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.29□□□□□ -0.6
Lsm6P62313 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.29□□□□□ -0.6
Lsm6P62313 Gm8652-201ENSMUST00000181363 964 ntBASIC11.29□□□□□ -0.6
Lsm6P62313 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Lsm6P62313 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.29□□□□□ -0.6
Lsm6P62313 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.29□□□□□ -0.6
Lsm6P62313 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Lsm6P62313 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Lsm6P62313 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.29□□□□□ -0.6
Lsm6P62313 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.29□□□□□ -0.6
Lsm6P62313 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.29□□□□□ -0.6
Lsm6P62313 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm6P62313 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.28□□□□□ -0.6
Lsm6P62313 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.28□□□□□ -0.6
Lsm6P62313 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Lsm6P62313 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.28□□□□□ -0.6
Lsm6P62313 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lsm6P62313 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Lsm6P62313 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Lsm6P62313 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.28□□□□□ -0.6
Lsm6P62313 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.28□□□□□ -0.6
Lsm6P62313 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.28□□□□□ -0.6
Lsm6P62313 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.28□□□□□ -0.6
Lsm6P62313 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.28□□□□□ -0.6
Lsm6P62313 Gm8099-201ENSMUST00000200510 742 ntBASIC11.28□□□□□ -0.6
Lsm6P62313 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.28□□□□□ -0.6
Lsm6P62313 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.28□□□□□ -0.6
Lsm6P62313 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms