Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Mir339-201ENSMUST00000083659 96 ntBASIC12.71□□□□□ -0.37
Pdx1P52946 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.71□□□□□ -0.37
Pdx1P52946 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
Pdx1P52946 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pdx1P52946 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pdx1P52946 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pdx1P52946 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pdx1P52946 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
Pdx1P52946 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pdx1P52946 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pdx1P52946 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pdx1P52946 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Pdx1P52946 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.7□□□□□ -0.38
Pdx1P52946 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pdx1P52946 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pdx1P52946 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.7□□□□□ -0.38
Pdx1P52946 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.7□□□□□ -0.38
Pdx1P52946 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.7□□□□□ -0.38
Pdx1P52946 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.7□□□□□ -0.38
Pdx1P52946 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.7□□□□□ -0.38
Pdx1P52946 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.7□□□□□ -0.38
Pdx1P52946 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.7□□□□□ -0.38
Pdx1P52946 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.7□□□□□ -0.38
Pdx1P52946 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pdx1P52946 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.7□□□□□ -0.38
Pdx1P52946 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.7□□□□□ -0.38
Pdx1P52946 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.7□□□□□ -0.38
Pdx1P52946 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdx1P52946 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.69□□□□□ -0.38
Pdx1P52946 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.69□□□□□ -0.38
Pdx1P52946 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Pdx1P52946 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.69□□□□□ -0.38
Pdx1P52946 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pdx1P52946 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Pdx1P52946 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pdx1P52946 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdx1P52946 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Pdx1P52946 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.69□□□□□ -0.38
Pdx1P52946 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pdx1P52946 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.68□□□□□ -0.38
Pdx1P52946 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pdx1P52946 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.68□□□□□ -0.38
Pdx1P52946 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Pdx1P52946 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.68□□□□□ -0.38
Pdx1P52946 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.68□□□□□ -0.38
Pdx1P52946 Gm6222-202ENSMUST00000182143 629 ntBASIC12.68□□□□□ -0.38
Pdx1P52946 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms