Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.41□□□□□ -0.42
Tnfsf4P43488 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.41□□□□□ -0.42
Tnfsf4P43488 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tnfsf4P43488 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.41□□□□□ -0.42
Tnfsf4P43488 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.4□□□□□ -0.42
Tnfsf4P43488 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Gm13813-201ENSMUST00000120998 787 ntBASIC12.4□□□□□ -0.42
Tnfsf4P43488 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Gm15429-201ENSMUST00000151268 798 ntBASIC12.4□□□□□ -0.42
Tnfsf4P43488 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.4□□□□□ -0.42
Tnfsf4P43488 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.4□□□□□ -0.42
Tnfsf4P43488 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf4P43488 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Tnfsf4P43488 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tnfsf4P43488 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Tnfsf4P43488 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.39□□□□□ -0.43
Tnfsf4P43488 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfsf4P43488 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.39□□□□□ -0.43
Tnfsf4P43488 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfsf4P43488 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Gm16372-201ENSMUST00000073088 450 ntBASIC12.39□□□□□ -0.43
Tnfsf4P43488 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tnfsf4P43488 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.39□□□□□ -0.43
Tnfsf4P43488 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.39□□□□□ -0.43
Tnfsf4P43488 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf4P43488 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.38□□□□□ -0.43
Tnfsf4P43488 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms