Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcl12P40224 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcl12P40224 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcl12P40224 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcl12P40224 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcl12P40224 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcl12P40224 Mir874-201ENSMUST00000104769 76 ntBASIC13.16□□□□□ -0.3
Cxcl12P40224 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcl12P40224 Gm12134-201ENSMUST00000122109 520 ntBASIC13.16□□□□□ -0.3
Cxcl12P40224 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.16□□□□□ -0.3
Cxcl12P40224 Gm15881-201ENSMUST00000148792 942 ntBASIC13.16□□□□□ -0.3
Cxcl12P40224 Gm25881-201ENSMUST00000157783 103 ntBASIC13.16□□□□□ -0.3
Cxcl12P40224 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cxcl12P40224 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.16□□□□□ -0.3
Cxcl12P40224 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.16□□□□□ -0.3
Cxcl12P40224 Mir7677-201ENSMUST00000184226 67 ntBASIC13.16□□□□□ -0.3
Cxcl12P40224 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.16□□□□□ -0.3
Cxcl12P40224 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcl12P40224 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cxcl12P40224 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.16□□□□□ -0.3
Cxcl12P40224 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.16□□□□□ -0.3
Cxcl12P40224 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.16□□□□□ -0.3
Cxcl12P40224 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Cxcl12P40224 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcl12P40224 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Cxcl12P40224 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.16□□□□□ -0.3
Cxcl12P40224 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcl12P40224 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcl12P40224 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Cxcl12P40224 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.16□□□□□ -0.3
Cxcl12P40224 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.16□□□□□ -0.3
Cxcl12P40224 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.15□□□□□ -0.3
Cxcl12P40224 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cxcl12P40224 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.15□□□□□ -0.3
Cxcl12P40224 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.15□□□□□ -0.3
Cxcl12P40224 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Cxcl12P40224 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cxcl12P40224 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.15□□□□□ -0.3
Cxcl12P40224 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Cxcl12P40224 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.15□□□□□ -0.3
Cxcl12P40224 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.15□□□□□ -0.3
Cxcl12P40224 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.15□□□□□ -0.3
Cxcl12P40224 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.15□□□□□ -0.3
Cxcl12P40224 Gm6905-201ENSMUST00000205729 511 ntBASIC13.15□□□□□ -0.3
Cxcl12P40224 Gm4607-201ENSMUST00000206649 577 ntBASIC13.15□□□□□ -0.3
Cxcl12P40224 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.15□□□□□ -0.3
Cxcl12P40224 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.15□□□□□ -0.3
Cxcl12P40224 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl12P40224 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.15□□□□□ -0.3
Cxcl12P40224 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cxcl12P40224 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cxcl12P40224 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cxcl12P40224 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl12P40224 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl12P40224 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.14□□□□□ -0.31
Cxcl12P40224 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl12P40224 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cxcl12P40224 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl12P40224 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl12P40224 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl12P40224 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.14□□□□□ -0.31
Cxcl12P40224 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl12P40224 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl12P40224 Gm22133-201ENSMUST00000102082 109 ntBASIC13.14□□□□□ -0.31
Cxcl12P40224 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl12P40224 Gm7851-201ENSMUST00000117574 323 ntBASIC13.14□□□□□ -0.31
Cxcl12P40224 Gm13315-201ENSMUST00000120376 991 ntBASIC13.14□□□□□ -0.31
Cxcl12P40224 Gm7666-201ENSMUST00000146631 819 ntBASIC13.14□□□□□ -0.31
Cxcl12P40224 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cxcl12P40224 Mir6546-201ENSMUST00000184460 62 ntBASIC13.14□□□□□ -0.31
Cxcl12P40224 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.14□□□□□ -0.31
Cxcl12P40224 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.14□□□□□ -0.31
Cxcl12P40224 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.14□□□□□ -0.31
Cxcl12P40224 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.14□□□□□ -0.31
Cxcl12P40224 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl12P40224 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl12P40224 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl12P40224 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms