Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.07□□□□□ -0.64
Slc6a1P31648 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Slc6a1P31648 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Slc6a1P31648 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Slc6a1P31648 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.07□□□□□ -0.64
Slc6a1P31648 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.07□□□□□ -0.64
Slc6a1P31648 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.07□□□□□ -0.64
Slc6a1P31648 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.07□□□□□ -0.64
Slc6a1P31648 Gm16476-201ENSMUST00000221544 139 ntBASIC11.07□□□□□ -0.64
Slc6a1P31648 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.07□□□□□ -0.64
Slc6a1P31648 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Slc6a1P31648 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.07□□□□□ -0.64
Slc6a1P31648 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Slc6a1P31648 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Slc6a1P31648 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.07□□□□□ -0.64
Slc6a1P31648 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.07□□□□□ -0.64
Slc6a1P31648 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Slc6a1P31648 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Slc6a1P31648 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Slc6a1P31648 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Slc6a1P31648 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.06□□□□□ -0.64
Slc6a1P31648 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.06□□□□□ -0.64
Slc6a1P31648 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.06□□□□□ -0.64
Slc6a1P31648 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.06□□□□□ -0.64
Slc6a1P31648 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Slc6a1P31648 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Slc6a1P31648 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.06□□□□□ -0.64
Slc6a1P31648 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Slc6a1P31648 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.06□□□□□ -0.64
Slc6a1P31648 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Slc6a1P31648 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Slc6a1P31648 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Slc6a1P31648 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.06□□□□□ -0.64
Slc6a1P31648 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms