Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pde6bP23440 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Pde6bP23440 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pde6bP23440 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.06□□□□□ -0.16
Pde6bP23440 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Pde6bP23440 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.05□□□□□ -0.16
Pde6bP23440 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Pde6bP23440 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.05□□□□□ -0.16
Pde6bP23440 Gm11964-201ENSMUST00000120982 444 ntBASIC14.05□□□□□ -0.16
Pde6bP23440 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.05□□□□□ -0.16
Pde6bP23440 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pde6bP23440 Gm17376-201ENSMUST00000166016 84 ntBASIC14.05□□□□□ -0.16
Pde6bP23440 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.05□□□□□ -0.16
Pde6bP23440 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.05□□□□□ -0.16
Pde6bP23440 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pde6bP23440 Gm18827-201ENSMUST00000188341 790 ntBASIC14.05□□□□□ -0.16
Pde6bP23440 Gm19891-201ENSMUST00000189771 303 ntBASIC14.05□□□□□ -0.16
Pde6bP23440 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.05□□□□□ -0.16
Pde6bP23440 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.05□□□□□ -0.16
Pde6bP23440 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Pde6bP23440 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.05□□□□□ -0.16
Pde6bP23440 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.05□□□□□ -0.16
Pde6bP23440 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.05□□□□□ -0.16
Pde6bP23440 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Mir433-201ENSMUST00000093564 124 ntBASIC14.05□□□□□ -0.16
Pde6bP23440 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pde6bP23440 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6bP23440 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.04□□□□□ -0.16
Pde6bP23440 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pde6bP23440 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.04□□□□□ -0.16
Pde6bP23440 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.04□□□□□ -0.16
Pde6bP23440 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Pde6bP23440 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.04□□□□□ -0.16
Pde6bP23440 Gm12502-201ENSMUST00000120197 444 ntBASIC14.04□□□□□ -0.16
Pde6bP23440 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.04□□□□□ -0.16
Pde6bP23440 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC14.04□□□□□ -0.16
Pde6bP23440 Mir3102-201ENSMUST00000175555 104 ntBASIC14.04□□□□□ -0.16
Pde6bP23440 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Pde6bP23440 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.04□□□□□ -0.16
Pde6bP23440 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.04□□□□□ -0.16
Pde6bP23440 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.04□□□□□ -0.16
Pde6bP23440 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pde6bP23440 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pde6bP23440 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.04□□□□□ -0.16
Pde6bP23440 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.04□□□□□ -0.16
Pde6bP23440 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.04□□□□□ -0.16
Pde6bP23440 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6bP23440 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6bP23440 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6bP23440 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6bP23440 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms